Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 AC124283.3-201ENST00000570869 594 ntBASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 WFDC1-204ENST00000613603 549 ntBASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 AC025048.6-201ENST00000634326 1161 ntBASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 AL138799.1-201ENST00000448213 1675 ntBASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZIC4Q8N9L1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.71□□□□□ -0.22
ZIC4Q8N9L1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
ZIC4Q8N9L1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZIC4Q8N9L1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.71□□□□□ -0.22
ZIC4Q8N9L1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
ZIC4Q8N9L1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZIC4Q8N9L1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZIC4Q8N9L1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.71□□□□□ -0.22
ZIC4Q8N9L1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZIC4Q8N9L1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.71□□□□□ -0.22
ZIC4Q8N9L1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.71□□□□□ -0.22
ZIC4Q8N9L1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 AC023157.3-201ENST00000619086 2088 ntBASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 AC093813.1-201ENST00000605066 256 ntBASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.7□□□□□ -0.22
ZIC4Q8N9L1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 AC144831.1-201ENST00000573312 2656 ntBASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 AC091951.1-201ENST00000512854 2465 ntBASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 AP005018.1-201ENST00000525475 301 ntBASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZIC4Q8N9L1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms