Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM50Q86XT4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 MIR1908-201ENST00000410394 80 ntBASIC17.28■□□□□ 0.36
TRIM50Q86XT4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM50Q86XT4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 AC127383.1-201ENST00000444697 1800 ntBASIC17.27■□□□□ 0.36
TRIM50Q86XT4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 RNU1-114P-201ENST00000365297 166 ntBASIC17.27■□□□□ 0.36
TRIM50Q86XT4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 AC009542.2-202ENST00000619004 1067 ntBASIC17.27■□□□□ 0.36
TRIM50Q86XT4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM50Q86XT4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM50Q86XT4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM50Q86XT4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM50Q86XT4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM50Q86XT4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TRIM50Q86XT4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 AL596257.1-201ENST00000641463 2694 ntBASIC17.26■□□□□ 0.35
TRIM50Q86XT4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.26■□□□□ 0.35
TRIM50Q86XT4 FAM197Y7-201ENST00000432892 766 ntBASIC17.26■□□□□ 0.35
TRIM50Q86XT4 C2orf27AP3-201ENST00000434123 579 ntBASIC17.26■□□□□ 0.35
TRIM50Q86XT4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.26■□□□□ 0.35
TRIM50Q86XT4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms