Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13BQ7Z7G8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 NPPA-201ENST00000376476 728 ntTSL 3 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 DNAJB1P1-201ENST00000429417 1024 ntBASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 AC005618.3-201ENST00000624928 458 ntBASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 AC078991.1-201ENST00000437297 610 ntBASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 RCC2P8-201ENST00000502779 1035 ntBASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 API5-202ENST00000420461 2009 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 AC242376.1-201ENST00000559033 726 ntBASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 RN7SL596P-201ENST00000582123 288 ntBASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 EIF5AP2-201ENST00000585668 1047 ntBASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS13BQ7Z7G8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 AL139094.1-201ENST00000405549 1188 ntBASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 SNORD3B-2-202ENST00000571722 791 ntBASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 AC004466.1-201ENST00000599515 1080 ntBASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 CYP51A1P3-201ENST00000400072 1428 ntBASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 E2F3P2-201ENST00000447755 1422 ntBASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS13BQ7Z7G8 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms