Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCR4P61073 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.21□□□□□ -0.13
CXCR4P61073 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
CXCR4P61073 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CXCR4P61073 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCR4P61073 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 AC004870.1-201ENST00000315132 882 ntBASIC14.21□□□□□ -0.13
CXCR4P61073 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CXCR4P61073 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCR4P61073 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CXCR4P61073 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.21□□□□□ -0.13
CXCR4P61073 RN7SL510P-201ENST00000581311 263 ntBASIC14.21□□□□□ -0.13
CXCR4P61073 AC024267.1-201ENST00000582320 895 ntBASIC14.21□□□□□ -0.13
CXCR4P61073 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CXCR4P61073 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.21□□□□□ -0.13
CXCR4P61073 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCR4P61073 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCR4P61073 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CXCR4P61073 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CXCR4P61073 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCR4P61073 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CXCR4P61073 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.21□□□□□ -0.14
CXCR4P61073 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCR4P61073 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CXCR4P61073 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCR4P61073 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCR4P61073 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CXCR4P61073 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCR4P61073 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCR4P61073 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
CXCR4P61073 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCR4P61073 BCAR1-209ENST00000546196 1340 ntBASIC14.2□□□□□ -0.14
CXCR4P61073 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 C8orf49-201ENST00000525043 1968 ntBASIC14.2□□□□□ -0.14
CXCR4P61073 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CXCR4P61073 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CXCR4P61073 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCR4P61073 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCR4P61073 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.2□□□□□ -0.14
CXCR4P61073 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.2□□□□□ -0.14
CXCR4P61073 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.2□□□□□ -0.14
CXCR4P61073 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCR4P61073 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.2□□□□□ -0.14
CXCR4P61073 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.2□□□□□ -0.14
CXCR4P61073 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CXCR4P61073 AC061975.2-201ENST00000581722 295 ntBASIC14.2□□□□□ -0.14
CXCR4P61073 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CXCR4P61073 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.2□□□□□ -0.14
CXCR4P61073 AL161645.1-201ENST00000622716 1255 ntBASIC14.2□□□□□ -0.14
CXCR4P61073 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCR4P61073 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CXCR4P61073 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 AC025580.3-201ENST00000617932 1424 ntBASIC14.2□□□□□ -0.14
CXCR4P61073 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.2□□□□□ -0.14
CXCR4P61073 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CXCR4P61073 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCR4P61073 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCR4P61073 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 AP001267.2-201ENST00000532619 2086 ntBASIC14.19□□□□□ -0.14
CXCR4P61073 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCR4P61073 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCR4P61073 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CXCR4P61073 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
CXCR4P61073 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCR4P61073 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CXCR4P61073 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCR4P61073 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms