Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
VPS29Q9UBQ0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 LINC02228-204ENST00000642115 2962 ntBASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 MROH4P-201ENST00000431302 1578 ntBASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 AC015922.1-201ENST00000421102 1152 ntBASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 KRT18P64-201ENST00000434946 1219 ntBASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 RPL13P2-201ENST00000440687 659 ntBASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 SDHAP3-202ENST00000515467 728 ntBASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 AC027369.6-201ENST00000525520 931 ntBASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 AC010336.2-201ENST00000564226 506 ntBASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 AC140878.1-201ENST00000565277 250 ntBASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 AC051619.7-201ENST00000568314 623 ntBASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 AC074044.1-201ENST00000609673 707 ntBASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 AF228730.6-201ENST00000641497 218 ntBASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 AC084121.3-201ENST00000641716 218 ntBASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VPS29Q9UBQ0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 AC107890.1-201ENST00000422478 521 ntBASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 AC067863.1-201ENST00000494933 530 ntBASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VPS29Q9UBQ0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms