Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 HK2P1-201ENST00000447818 2737 ntBASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 GPR89P-201ENST00000407924 1495 ntBASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CDC42SE1Q9NRR8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 PCSK1-202ENST00000508626 2234 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AC006504.4-201ENST00000592118 1568 ntBASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 ZNF142-201ENST00000411696 5926 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 SLC37A2-201ENST00000308074 2696 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42SE1Q9NRR8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms