Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC25A1P53007 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SLC25A1P53007 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.85□□□□□ -0.19
SLC25A1P53007 AP000347.1-202ENST00000435868 847 ntBASIC13.85□□□□□ -0.19
SLC25A1P53007 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC25A1P53007 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC25A1P53007 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC25A1P53007 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SLC25A1P53007 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC25A1P53007 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC25A1P53007 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.85□□□□□ -0.19
SLC25A1P53007 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC25A1P53007 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC25A1P53007 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.85□□□□□ -0.19
SLC25A1P53007 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC25A1P53007 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SLC25A1P53007 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLC25A1P53007 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC25A1P53007 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.85□□□□□ -0.19
SLC25A1P53007 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SLC25A1P53007 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC25A1P53007 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SLC25A1P53007 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC25A1P53007 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 CETN4P-206ENST00000642099 2168 ntBASIC13.84□□□□□ -0.19
SLC25A1P53007 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SLC25A1P53007 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
SLC25A1P53007 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC25A1P53007 AL080243.2-201ENST00000418783 582 ntBASIC13.84□□□□□ -0.19
SLC25A1P53007 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC25A1P53007 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC25A1P53007 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC25A1P53007 AC023141.5-201ENST00000458585 616 ntBASIC13.84□□□□□ -0.19
SLC25A1P53007 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC25A1P53007 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC25A1P53007 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC25A1P53007 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC25A1P53007 AL589739.1-201ENST00000607720 493 ntBASIC13.84□□□□□ -0.19
SLC25A1P53007 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
SLC25A1P53007 MIR6080-201ENST00000617359 66 ntBASIC13.84□□□□□ -0.19
SLC25A1P53007 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC25A1P53007 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC25A1P53007 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SLC25A1P53007 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC25A1P53007 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SLC25A1P53007 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC25A1P53007 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC25A1P53007 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.83□□□□□ -0.19
SLC25A1P53007 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SLC25A1P53007 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SLC25A1P53007 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SLC25A1P53007 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SLC25A1P53007 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SLC25A1P53007 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC25A1P53007 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC25A1P53007 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC25A1P53007 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC25A1P53007 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms