Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC175P0C221 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC175P0C221 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC175P0C221 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC175P0C221 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC175P0C221 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC175P0C221 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC175P0C221 AC098831.1-202ENST00000438821 336 ntBASIC16.87■□□□□ 0.29
CCDC175P0C221 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC175P0C221 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC175P0C221 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC175P0C221 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC175P0C221 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CCDC175P0C221 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC175P0C221 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC175P0C221 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CCDC175P0C221 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC175P0C221 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC175P0C221 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC175P0C221 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC175P0C221 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC175P0C221 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CCDC175P0C221 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CCDC175P0C221 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC175P0C221 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.86■□□□□ 0.29
CCDC175P0C221 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
CCDC175P0C221 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC175P0C221 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC175P0C221 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.86■□□□□ 0.29
CCDC175P0C221 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CCDC175P0C221 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CCDC175P0C221 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 AC025580.3-201ENST00000617932 1424 ntBASIC16.86■□□□□ 0.29
CCDC175P0C221 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC175P0C221 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC175P0C221 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC175P0C221 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC175P0C221 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC175P0C221 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC175P0C221 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC175P0C221 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC175P0C221 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC175P0C221 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC175P0C221 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC175P0C221 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC175P0C221 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC175P0C221 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC175P0C221 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC175P0C221 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CCDC175P0C221 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms