Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
CD74P04233 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.12□□□□□ -0.31
CD74P04233 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CD74P04233 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.12□□□□□ -0.31
CD74P04233 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.12□□□□□ -0.31
CD74P04233 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CD74P04233 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CD74P04233 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CD74P04233 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.12□□□□□ -0.31
CD74P04233 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 CICP20-201ENST00000443330 2801 ntBASIC13.12□□□□□ -0.31
CD74P04233 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CD74P04233 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.12□□□□□ -0.31
CD74P04233 HNRNPDP1-201ENST00000439535 754 ntBASIC13.12□□□□□ -0.31
CD74P04233 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CD74P04233 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.12□□□□□ -0.31
CD74P04233 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.12□□□□□ -0.31
CD74P04233 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.12□□□□□ -0.31
CD74P04233 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.12□□□□□ -0.31
CD74P04233 AL161645.1-201ENST00000622716 1255 ntBASIC13.12□□□□□ -0.31
CD74P04233 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.12□□□□□ -0.31
CD74P04233 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.12□□□□□ -0.31
CD74P04233 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.12□□□□□ -0.31
CD74P04233 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.12□□□□□ -0.31
CD74P04233 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.12□□□□□ -0.31
CD74P04233 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.12□□□□□ -0.31
CD74P04233 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CD74P04233 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.12□□□□□ -0.31
CD74P04233 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CD74P04233 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD74P04233 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CD74P04233 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.12□□□□□ -0.31
CD74P04233 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CD74P04233 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CD74P04233 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CD74P04233 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 AL607033.1-201ENST00000623900 1599 ntBASIC13.11□□□□□ -0.31
CD74P04233 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.11□□□□□ -0.31
CD74P04233 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.11□□□□□ -0.31
CD74P04233 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CD74P04233 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CD74P04233 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CD74P04233 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.11□□□□□ -0.31
CD74P04233 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.11□□□□□ -0.31
CD74P04233 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.11□□□□□ -0.31
CD74P04233 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.11□□□□□ -0.31
CD74P04233 HCG4B-203ENST00000450128 991 ntBASIC13.11□□□□□ -0.31
CD74P04233 AC018712.1-201ENST00000455767 687 ntBASIC13.11□□□□□ -0.31
CD74P04233 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.11□□□□□ -0.31
CD74P04233 AC105233.2-201ENST00000523697 349 ntBASIC13.11□□□□□ -0.31
CD74P04233 AF228730.5-201ENST00000530288 346 ntBASIC13.11□□□□□ -0.31
CD74P04233 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.11□□□□□ -0.31
CD74P04233 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 AC010507.1-201ENST00000633895 436 ntBASIC13.11□□□□□ -0.31
CD74P04233 AC007064.4-201ENST00000637740 555 ntBASIC13.11□□□□□ -0.31
CD74P04233 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
CD74P04233 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CD74P04233 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD74P04233 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms