Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.72■□□□□ 0.11
KDELR3O43731 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDELR3O43731 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
KDELR3O43731 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.72■□□□□ 0.11
KDELR3O43731 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
KDELR3O43731 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.72■□□□□ 0.11
KDELR3O43731 AL512384.1-201ENST00000406683 331 ntBASIC15.72■□□□□ 0.11
KDELR3O43731 GHSR-202ENST00000427970 912 ntBASIC15.72■□□□□ 0.11
KDELR3O43731 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.72■□□□□ 0.11
KDELR3O43731 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDELR3O43731 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
KDELR3O43731 AP001582.1-201ENST00000525856 295 ntBASIC15.72■□□□□ 0.11
KDELR3O43731 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.72■□□□□ 0.11
KDELR3O43731 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.72■□□□□ 0.11
KDELR3O43731 SAMD11P1-201ENST00000571429 661 ntBASIC15.72■□□□□ 0.11
KDELR3O43731 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
KDELR3O43731 AC132938.2-201ENST00000579188 680 ntBASIC15.72■□□□□ 0.11
KDELR3O43731 CLUHP6-201ENST00000580789 941 ntBASIC15.72■□□□□ 0.11
KDELR3O43731 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.72■□□□□ 0.11
KDELR3O43731 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.72■□□□□ 0.11
KDELR3O43731 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.72■□□□□ 0.11
KDELR3O43731 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
KDELR3O43731 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.72■□□□□ 0.11
KDELR3O43731 AC005252.2-201ENST00000624630 1141 ntBASIC15.72■□□□□ 0.11
KDELR3O43731 AL591163.1-201ENST00000641757 987 ntBASIC15.72■□□□□ 0.11
KDELR3O43731 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDELR3O43731 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.72■□□□□ 0.11
KDELR3O43731 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDELR3O43731 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDELR3O43731 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDELR3O43731 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDELR3O43731 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
KDELR3O43731 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KDELR3O43731 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
KDELR3O43731 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDELR3O43731 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
KDELR3O43731 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDELR3O43731 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
KDELR3O43731 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KDELR3O43731 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
KDELR3O43731 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KDELR3O43731 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
KDELR3O43731 AC093525.8-201ENST00000624099 1342 ntBASIC15.71■□□□□ 0.11
KDELR3O43731 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 AC007787.1-201ENST00000588095 1583 ntBASIC15.71■□□□□ 0.11
KDELR3O43731 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.71■□□□□ 0.11
KDELR3O43731 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
KDELR3O43731 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.71■□□□□ 0.11
KDELR3O43731 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.71■□□□□ 0.11
KDELR3O43731 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KDELR3O43731 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.71■□□□□ 0.11
KDELR3O43731 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
KDELR3O43731 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
KDELR3O43731 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.71■□□□□ 0.11
KDELR3O43731 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.71■□□□□ 0.11
KDELR3O43731 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.71■□□□□ 0.11
KDELR3O43731 ACTG1P3-201ENST00000431775 1114 ntBASIC15.71■□□□□ 0.11
KDELR3O43731 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.71■□□□□ 0.11
KDELR3O43731 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
KDELR3O43731 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.71■□□□□ 0.11
KDELR3O43731 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.71■□□□□ 0.11
KDELR3O43731 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.71■□□□□ 0.11
KDELR3O43731 AC010319.3-201ENST00000597028 470 ntBASIC15.71■□□□□ 0.11
KDELR3O43731 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.71■□□□□ 0.11
KDELR3O43731 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
KDELR3O43731 IGHV3-72-202ENST00000621503 303 ntBASIC15.71■□□□□ 0.11
KDELR3O43731 RPSAP52-203ENST00000622976 1023 ntBASIC15.71■□□□□ 0.11
KDELR3O43731 BX539320.1-201ENST00000623759 877 ntBASIC15.71■□□□□ 0.11
KDELR3O43731 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.71■□□□□ 0.11
KDELR3O43731 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.71■□□□□ 0.11
KDELR3O43731 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KDELR3O43731 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
KDELR3O43731 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.71■□□□□ 0.1
KDELR3O43731 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.71■□□□□ 0.1
KDELR3O43731 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KDELR3O43731 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KDELR3O43731 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KDELR3O43731 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms