Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 MPV17-206ENST00000402722 827 ntTSL 3 BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 FTH1P14-201ENST00000482930 551 ntBASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NPC1L1Q9UHC9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 AC046158.3-201ENST00000624947 2558 ntBASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 AGAP7P-201ENST00000582299 2062 ntBASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 AGAP14-201ENST00000624701 2060 ntBASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 AC112492.5-201ENST00000421897 457 ntBASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 AC007274.1-201ENST00000439805 662 ntBASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 ACA64.2-201ENST00000459014 129 ntBASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPC1L1Q9UHC9 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 KRT43P-201ENST00000434019 910 ntBASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 AC119751.2-201ENST00000504529 210 ntBASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 AC091951.1-201ENST00000512854 2465 ntBASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 KRT17P8-201ENST00000540749 863 ntBASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 AL137783.1-201ENST00000623494 1896 ntBASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 AC132938.4-201ENST00000623835 848 ntBASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms