Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 BRI3BPP1-201ENST00000594224 787 ntBASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HDAC6Q9UBN7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 AP003680.1-201ENST00000598970 3660 ntBASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 AC022532.1-201ENST00000624563 1728 ntBASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 AL162726.2-201ENST00000438986 1017 ntBASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 AC233724.13-201ENST00000598383 410 ntBASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.62■□□□□ 0.41
HDAC6Q9UBN7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 BOLA2P3-201ENST00000404566 256 ntBASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 TOMM22P5-201ENST00000416399 439 ntBASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 ACTG1P3-201ENST00000431775 1114 ntBASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 KRT43P-201ENST00000434019 910 ntBASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.61■□□□□ 0.41
HDAC6Q9UBN7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms