Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 WASH6P-202ENST00000359512 1437 ntBASIC13.96□□□□□ -0.18
LRRC28Q86X40 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRC28Q86X40 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRC28Q86X40 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.96□□□□□ -0.18
LRRC28Q86X40 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LRRC28Q86X40 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.96□□□□□ -0.18
LRRC28Q86X40 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRC28Q86X40 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.96□□□□□ -0.18
LRRC28Q86X40 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
LRRC28Q86X40 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
LRRC28Q86X40 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.96□□□□□ -0.18
LRRC28Q86X40 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRC28Q86X40 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRC28Q86X40 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRC28Q86X40 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.95□□□□□ -0.18
LRRC28Q86X40 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 AC004461.1-201ENST00000412461 403 ntBASIC13.95□□□□□ -0.18
LRRC28Q86X40 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 TIMM8BP1-201ENST00000452384 211 ntBASIC13.95□□□□□ -0.18
LRRC28Q86X40 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 AL135744.1-201ENST00000565098 629 ntBASIC13.95□□□□□ -0.18
LRRC28Q86X40 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 AC022145.2-201ENST00000598203 171 ntBASIC13.95□□□□□ -0.18
LRRC28Q86X40 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 AC148477.4-201ENST00000613430 1793 ntBASIC13.95□□□□□ -0.18
LRRC28Q86X40 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC28Q86X40 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC28Q86X40 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms