Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.47■□□□□ 0.23
VARS2Q5ST30 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 C2orf27AP3-201ENST00000434123 579 ntBASIC16.47■□□□□ 0.23
VARS2Q5ST30 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 KRT18P25-201ENST00000508931 1278 ntBASIC16.47■□□□□ 0.23
VARS2Q5ST30 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 AL583810.1-201ENST00000553344 1045 ntBASIC16.47■□□□□ 0.23
VARS2Q5ST30 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 AL353729.2-201ENST00000605859 1249 ntBASIC16.47■□□□□ 0.23
VARS2Q5ST30 AC022960.2-201ENST00000616300 666 ntBASIC16.47■□□□□ 0.23
VARS2Q5ST30 AL354718.3-201ENST00000616414 581 ntBASIC16.47■□□□□ 0.23
VARS2Q5ST30 CR382287.1-201ENST00000623954 586 ntBASIC16.47■□□□□ 0.23
VARS2Q5ST30 AL356094.1-201ENST00000624663 1212 ntBASIC16.47■□□□□ 0.23
VARS2Q5ST30 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
VARS2Q5ST30 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VARS2Q5ST30 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 RPS6P14-201ENST00000425165 719 ntBASIC16.46■□□□□ 0.23
VARS2Q5ST30 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 MIR6869-201ENST00000619434 62 ntBASIC16.46■□□□□ 0.23
VARS2Q5ST30 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VARS2Q5ST30 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.46■□□□□ 0.23
VARS2Q5ST30 AC022188.1-201ENST00000620960 1664 ntBASIC16.46■□□□□ 0.23
VARS2Q5ST30 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.46■□□□□ 0.22
VARS2Q5ST30 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.46■□□□□ 0.22
VARS2Q5ST30 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
VARS2Q5ST30 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.45■□□□□ 0.22
VARS2Q5ST30 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VARS2Q5ST30 AC127383.1-201ENST00000444697 1800 ntBASIC16.45■□□□□ 0.22
VARS2Q5ST30 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms