Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT9P35527 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT9P35527 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.12■□□□□ 0.33
KRT9P35527 AC093520.2-201ENST00000561830 333 ntBASIC17.12■□□□□ 0.33
KRT9P35527 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
KRT9P35527 AC097359.3-201ENST00000603982 1210 ntBASIC17.12■□□□□ 0.33
KRT9P35527 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KRT9P35527 AC232323.1-201ENST00000540724 2099 ntBASIC17.12■□□□□ 0.33
KRT9P35527 REXO1L5P-201ENST00000622260 2098 ntBASIC17.12■□□□□ 0.33
KRT9P35527 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT9P35527 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
KRT9P35527 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT9P35527 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT9P35527 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT9P35527 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
KRT9P35527 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT9P35527 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
KRT9P35527 AC254562.1-201ENST00000417586 456 ntBASIC17.11■□□□□ 0.33
KRT9P35527 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT9P35527 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT9P35527 RBPMS2P1-201ENST00000437762 623 ntBASIC17.11■□□□□ 0.33
KRT9P35527 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.11■□□□□ 0.33
KRT9P35527 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.11■□□□□ 0.33
KRT9P35527 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.11■□□□□ 0.33
KRT9P35527 HNRNPUP1-201ENST00000554987 333 ntBASIC17.11■□□□□ 0.33
KRT9P35527 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KRT9P35527 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
KRT9P35527 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT9P35527 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT9P35527 AJ011931.1-201ENST00000618749 2492 ntBASIC17.11■□□□□ 0.33
KRT9P35527 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KRT9P35527 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.11■□□□□ 0.33
KRT9P35527 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRT9P35527 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
KRT9P35527 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KRT9P35527 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT9P35527 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT9P35527 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT9P35527 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 ZBED1P1-201ENST00000502364 1930 ntBASIC17.1■□□□□ 0.33
KRT9P35527 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.1■□□□□ 0.33
KRT9P35527 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KRT9P35527 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT9P35527 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.1■□□□□ 0.33
KRT9P35527 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.1■□□□□ 0.33
KRT9P35527 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
KRT9P35527 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KRT9P35527 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.1■□□□□ 0.33
KRT9P35527 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KRT9P35527 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KRT9P35527 AC134684.3-201ENST00000641758 218 ntBASIC17.1■□□□□ 0.33
KRT9P35527 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KRT9P35527 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRT9P35527 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.1■□□□□ 0.33
KRT9P35527 MROH4P-201ENST00000431302 1578 ntBASIC17.1■□□□□ 0.33
KRT9P35527 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KRT9P35527 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms