Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.41□□□□□ -0.42
IFNA1P01562 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
IFNA1P01562 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
IFNA1P01562 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
IFNA1P01562 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.41□□□□□ -0.42
IFNA1P01562 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
IFNA1P01562 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.4□□□□□ -0.42
IFNA1P01562 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
IFNA1P01562 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.4□□□□□ -0.42
IFNA1P01562 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
IFNA1P01562 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.4□□□□□ -0.42
IFNA1P01562 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 PI4KAP1-204ENST00000612579 1703 ntBASIC12.4□□□□□ -0.42
IFNA1P01562 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.4□□□□□ -0.42
IFNA1P01562 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
IFNA1P01562 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
IFNA1P01562 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.4□□□□□ -0.42
IFNA1P01562 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 YBX1P2-201ENST00000489612 999 ntBASIC12.4□□□□□ -0.42
IFNA1P01562 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.4□□□□□ -0.42
IFNA1P01562 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.4□□□□□ -0.42
IFNA1P01562 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.4□□□□□ -0.42
IFNA1P01562 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.4□□□□□ -0.42
IFNA1P01562 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.4□□□□□ -0.42
IFNA1P01562 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.4□□□□□ -0.42
IFNA1P01562 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
IFNA1P01562 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
IFNA1P01562 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
IFNA1P01562 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
IFNA1P01562 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
IFNA1P01562 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
IFNA1P01562 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.4□□□□□ -0.43
IFNA1P01562 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.39□□□□□ -0.43
IFNA1P01562 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.39□□□□□ -0.43
IFNA1P01562 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
IFNA1P01562 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
IFNA1P01562 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
IFNA1P01562 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
IFNA1P01562 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 PRYP5-201ENST00000451909 266 ntBASIC12.39□□□□□ -0.43
IFNA1P01562 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.39□□□□□ -0.43
IFNA1P01562 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.39□□□□□ -0.43
IFNA1P01562 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.39□□□□□ -0.43
IFNA1P01562 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.39□□□□□ -0.43
IFNA1P01562 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.39□□□□□ -0.43
IFNA1P01562 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.39□□□□□ -0.43
IFNA1P01562 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.39□□□□□ -0.43
IFNA1P01562 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.39□□□□□ -0.43
IFNA1P01562 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms