Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LHX6Q9UPM6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LHX6Q9UPM6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LHX6Q9UPM6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LHX6Q9UPM6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LHX6Q9UPM6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.94□□□□□ -0.02
LHX6Q9UPM6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 IL12A-205ENST00000480787 863 ntTSL 3 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 IQSEC3P1-201ENST00000538799 536 ntBASIC14.93□□□□□ -0.02
LHX6Q9UPM6 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 AC104982.3-201ENST00000581995 514 ntBASIC14.93□□□□□ -0.02
LHX6Q9UPM6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 AC005332.10-201ENST00000612725 619 ntBASIC14.93□□□□□ -0.02
LHX6Q9UPM6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LHX6Q9UPM6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 PCDHA1-201ENST00000378133 2726 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 BAATP1-201ENST00000412284 1225 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 SOCS2P1-201ENST00000417727 557 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AC104784.1-201ENST00000473096 294 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AC016550.3-201ENST00000515706 767 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AC009486.1-201ENST00000569860 813 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AC024267.1-201ENST00000582320 895 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AL023583.1-201ENST00000607518 1143 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AC092574.1-201ENST00000609771 420 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 SNX33P1-201ENST00000592116 1762 ntBASIC14.92□□□□□ -0.02
LHX6Q9UPM6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LHX6Q9UPM6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms