Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 LINC02199-201ENST00000506655 2702 ntBASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBE2OQ9C0C9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 AL590640.2-201ENST00000457038 527 ntBASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 RN7SL11P-201ENST00000471305 293 ntBASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 KRT18P25-201ENST00000508931 1278 ntBASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 AC145423.3-201ENST00000615987 467 ntBASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBE2OQ9C0C9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 HLA-A-202ENST00000376806 1854 ntBASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 RNA5SP486-201ENST00000515961 83 ntBASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 AC006453.4-201ENST00000636949 1252 ntBASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 GGT3P-204ENST00000453783 1664 ntBASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 PCGF3-213ENST00000620529 1899 ntBASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.16■□□□□ 0.34
UBE2OQ9C0C9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 DOC2GP-204ENST00000639052 2548 ntBASIC17.15■□□□□ 0.34
UBE2OQ9C0C9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms