Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 LINC00554-201ENST00000564841 3011 ntBASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 AC092850.2-201ENST00000623821 2697 ntBASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 C1QBPP1-201ENST00000400117 770 ntBASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 INE1-201ENST00000456273 945 ntBASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 AC025181.2-201ENST00000606994 802 ntBASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRTM4Q86VH4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 AC007950.2-201ENST00000615045 2347 ntBASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 DRD5P1-201ENST00000456605 1438 ntBASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 KRT8P22-201ENST00000562317 1415 ntBASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 AC026410.3-201ENST00000514280 936 ntBASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 AC124283.3-201ENST00000570869 594 ntBASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRTM4Q86VH4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms