Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 AC091951.1-201ENST00000512854 2465 ntBASIC14.52□□□□□ -0.09
TUBA1AQ71U36 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 YBX1P5-201ENST00000509441 847 ntBASIC14.51□□□□□ -0.09
TUBA1AQ71U36 KRT8P48-201ENST00000515599 1220 ntBASIC14.51□□□□□ -0.09
TUBA1AQ71U36 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 AL135744.1-201ENST00000565098 629 ntBASIC14.51□□□□□ -0.09
TUBA1AQ71U36 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 AC021097.1-201ENST00000607902 574 ntBASIC14.51□□□□□ -0.09
TUBA1AQ71U36 GPALPP1-207ENST00000611650 899 ntBASIC14.51□□□□□ -0.09
TUBA1AQ71U36 AL161645.1-201ENST00000622716 1255 ntBASIC14.51□□□□□ -0.09
TUBA1AQ71U36 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1AQ71U36 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 AC005840.4-201ENST00000541242 2494 ntBASIC14.5□□□□□ -0.09
TUBA1AQ71U36 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 TFAMP1-201ENST00000412727 736 ntBASIC14.5□□□□□ -0.09
TUBA1AQ71U36 ADH5P3-201ENST00000433842 1137 ntBASIC14.5□□□□□ -0.09
TUBA1AQ71U36 SPDYE11-202ENST00000450699 704 ntBASIC14.5□□□□□ -0.09
TUBA1AQ71U36 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 SPDYE9P-201ENST00000570642 692 ntBASIC14.5□□□□□ -0.09
TUBA1AQ71U36 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 SPDYE10P-202ENST00000612005 668 ntBASIC14.5□□□□□ -0.09
TUBA1AQ71U36 SPDYE8P-202ENST00000612377 668 ntBASIC14.5□□□□□ -0.09
TUBA1AQ71U36 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TUBA1AQ71U36 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.5□□□□□ -0.09
TUBA1AQ71U36 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms