Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.3□□□□□ -0.12
LTBQ06643 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LTBQ06643 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LTBQ06643 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.3□□□□□ -0.12
LTBQ06643 ARSEP1-201ENST00000420443 635 ntBASIC14.3□□□□□ -0.12
LTBQ06643 MTND6P24-201ENST00000440466 518 ntBASIC14.3□□□□□ -0.12
LTBQ06643 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LTBQ06643 KRT17P7-201ENST00000451704 1104 ntBASIC14.3□□□□□ -0.12
LTBQ06643 RN7SL692P-201ENST00000464677 288 ntBASIC14.3□□□□□ -0.12
LTBQ06643 AL512356.2-201ENST00000546955 174 ntBASIC14.3□□□□□ -0.12
LTBQ06643 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.3□□□□□ -0.12
LTBQ06643 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.3□□□□□ -0.12
LTBQ06643 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LTBQ06643 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LTBQ06643 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 FO538757.1-201ENST00000623083 1397 ntBASIC14.3□□□□□ -0.12
LTBQ06643 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.3□□□□□ -0.12
LTBQ06643 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.3□□□□□ -0.12
LTBQ06643 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LTBQ06643 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.29□□□□□ -0.12
LTBQ06643 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.29□□□□□ -0.12
LTBQ06643 AC112693.3-201ENST00000624819 1983 ntBASIC14.29□□□□□ -0.12
LTBQ06643 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LTBQ06643 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.29□□□□□ -0.12
LTBQ06643 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 AC136604.1-201ENST00000418535 575 ntBASIC14.29□□□□□ -0.12
LTBQ06643 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.29□□□□□ -0.12
LTBQ06643 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.29□□□□□ -0.12
LTBQ06643 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.29□□□□□ -0.12
LTBQ06643 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.29□□□□□ -0.12
LTBQ06643 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LTBQ06643 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.29□□□□□ -0.12
LTBQ06643 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.29□□□□□ -0.12
LTBQ06643 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.29□□□□□ -0.12
LTBQ06643 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.29□□□□□ -0.12
LTBQ06643 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.29□□□□□ -0.12
LTBQ06643 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.29□□□□□ -0.12
LTBQ06643 AL662799.1-202ENST00000614205 422 ntBASIC14.29□□□□□ -0.12
LTBQ06643 MIR6080-201ENST00000617359 66 ntBASIC14.29□□□□□ -0.12
LTBQ06643 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LTBQ06643 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.29□□□□□ -0.12
LTBQ06643 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LTBQ06643 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 TNRC18P2-201ENST00000417666 2714 ntBASIC14.29□□□□□ -0.12
LTBQ06643 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.29□□□□□ -0.12
LTBQ06643 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LTBQ06643 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.29□□□□□ -0.12
LTBQ06643 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.29□□□□□ -0.12
LTBQ06643 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LTBQ06643 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.29□□□□□ -0.12
LTBQ06643 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LTBQ06643 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LTBQ06643 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LTBQ06643 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LTBQ06643 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LTBQ06643 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LTBQ06643 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LTBQ06643 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms