Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLK1P49759 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CLK1P49759 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.78□□□□□ -0.04
CLK1P49759 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.78□□□□□ -0.04
CLK1P49759 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLK1P49759 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.78□□□□□ -0.04
CLK1P49759 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.78□□□□□ -0.04
CLK1P49759 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 RPSAP43-201ENST00000402237 625 ntBASIC14.78□□□□□ -0.04
CLK1P49759 GPX1P2-201ENST00000429271 606 ntBASIC14.78□□□□□ -0.04
CLK1P49759 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.78□□□□□ -0.04
CLK1P49759 CEND1P1-201ENST00000451006 455 ntBASIC14.78□□□□□ -0.04
CLK1P49759 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.78□□□□□ -0.04
CLK1P49759 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLK1P49759 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
CLK1P49759 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.78□□□□□ -0.04
CLK1P49759 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.78□□□□□ -0.04
CLK1P49759 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.78□□□□□ -0.04
CLK1P49759 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
CLK1P49759 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLK1P49759 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLK1P49759 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CLK1P49759 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLK1P49759 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLK1P49759 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLK1P49759 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.78□□□□□ -0.04
CLK1P49759 AC087481.3-201ENST00000602886 1894 ntBASIC14.78□□□□□ -0.04
CLK1P49759 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLK1P49759 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLK1P49759 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.77□□□□□ -0.04
CLK1P49759 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.77□□□□□ -0.04
CLK1P49759 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.77□□□□□ -0.04
CLK1P49759 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLK1P49759 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.77□□□□□ -0.04
CLK1P49759 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.77□□□□□ -0.04
CLK1P49759 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLK1P49759 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLK1P49759 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
CLK1P49759 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLK1P49759 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLK1P49759 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLK1P49759 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
CLK1P49759 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.77□□□□□ -0.05
CLK1P49759 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.77□□□□□ -0.05
CLK1P49759 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLK1P49759 AC112482.1-201ENST00000492080 688 ntBASIC14.77□□□□□ -0.05
CLK1P49759 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLK1P49759 AC098859.1-201ENST00000502915 1238 ntBASIC14.77□□□□□ -0.05
CLK1P49759 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.77□□□□□ -0.05
CLK1P49759 AC243562.1-201ENST00000560672 389 ntBASIC14.77□□□□□ -0.05
CLK1P49759 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLK1P49759 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.77□□□□□ -0.05
CLK1P49759 AC027307.2-201ENST00000591252 911 ntBASIC14.77□□□□□ -0.05
CLK1P49759 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.77□□□□□ -0.05
CLK1P49759 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLK1P49759 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
CLK1P49759 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CLK1P49759 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CLK1P49759 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.77□□□□□ -0.05
CLK1P49759 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.77□□□□□ -0.05
CLK1P49759 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLK1P49759 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLK1P49759 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.77□□□□□ -0.05
CLK1P49759 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.77□□□□□ -0.05
CLK1P49759 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLK1P49759 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLK1P49759 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CLK1P49759 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLK1P49759 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.77□□□□□ -0.05
CLK1P49759 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.77□□□□□ -0.05
CLK1P49759 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.77□□□□□ -0.05
CLK1P49759 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.77□□□□□ -0.05
CLK1P49759 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLK1P49759 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.76□□□□□ -0.05
CLK1P49759 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.76□□□□□ -0.05
CLK1P49759 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLK1P49759 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms