Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RIMBP3Q9UFD9 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 AC104581.1-202ENST00000635932 2618 ntBASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 AC092570.1-201ENST00000414446 469 ntBASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 BX088651.3-201ENST00000418155 352 ntBASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 KRT8P30-201ENST00000432100 650 ntBASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 RN7SL121P-201ENST00000584223 273 ntBASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC23.86■■□□□ 1.41
RIMBP3Q9UFD9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 AC027612.2-202ENST00000445955 1199 ntBASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 AC006986.1-201ENST00000612764 241 ntBASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RIMBP3Q9UFD9 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 RGS5-216ENST00000449680 788 ntTSL 3 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 CASP3-205ENST00000517513 964 ntTSL 5 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 EHF-205ENST00000527935 557 ntTSL 2 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 AC023968.2-201ENST00000560593 1049 ntBASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 AC008825.2-201ENST00000603374 718 ntBASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 GGTLC4P-201ENST00000402176 664 ntBASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 CSNK1G2P1-201ENST00000442675 955 ntBASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 AC026434.2-201ENST00000506094 1078 ntBASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 KNOP1P1-201ENST00000542108 989 ntBASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC23.84■■□□□ 1.41
RIMBP3Q9UFD9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RIMBP3Q9UFD9 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms