Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB3IPQ96QF0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAB3IPQ96QF0 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAB3IPQ96QF0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.33■□□□□ 0.05
RAB3IPQ96QF0 AL731571.1-201ENST00000617058 5428 ntBASIC15.33■□□□□ 0.05
RAB3IPQ96QF0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
RAB3IPQ96QF0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.33■□□□□ 0.05
RAB3IPQ96QF0 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAB3IPQ96QF0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 TSPY22P-201ENST00000427496 604 ntBASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 KRT18P38-201ENST00000449496 1282 ntBASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 AC022616.7-201ENST00000525383 220 ntBASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 AC089987.1-201ENST00000551654 2209 ntBASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAB3IPQ96QF0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 AC079776.2-201ENST00000641154 1609 ntBASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 MST1P2-201ENST00000457982 2291 ntBASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 AC027612.1-201ENST00000445234 2395 ntBASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 AL356585.2-201ENST00000625078 2396 ntBASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3IPQ96QF0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 COL6A4P2-202ENST00000504443 2753 ntBASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 DMBT1P1-203ENST00000636837 4628 ntBASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 ACE3P-201ENST00000423435 1973 ntBASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3IPQ96QF0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms