Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 AC105250.1-201ENST00000509378 2057 ntBASIC18.6■□□□□ 0.57
DDX11Q96FC9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX11Q96FC9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX11Q96FC9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX11Q96FC9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX11Q96FC9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DDX11Q96FC9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX11Q96FC9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 AC138969.3-201ENST00000546612 1459 ntBASIC18.59■□□□□ 0.57
DDX11Q96FC9 AC138932.2-201ENST00000548268 1459 ntBASIC18.59■□□□□ 0.57
DDX11Q96FC9 AC126755.4-201ENST00000549796 1459 ntBASIC18.59■□□□□ 0.57
DDX11Q96FC9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX11Q96FC9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 KRT8P12-202ENST00000472924 1397 ntBASIC18.59■□□□□ 0.57
DDX11Q96FC9 AC090616.6-203ENST00000579186 1945 ntBASIC18.59■□□□□ 0.57
DDX11Q96FC9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX11Q96FC9 AC023824.1-201ENST00000562945 2975 ntBASIC18.59■□□□□ 0.57
DDX11Q96FC9 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX11Q96FC9 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 AC087499.6-201ENST00000411576 835 ntBASIC18.59■□□□□ 0.57
DDX11Q96FC9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 DFFBP1-201ENST00000433250 979 ntBASIC18.59■□□□□ 0.57
DDX11Q96FC9 DOC2GP-202ENST00000514950 1163 ntBASIC18.59■□□□□ 0.57
DDX11Q96FC9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX11Q96FC9 AL008721.1-201ENST00000609964 604 ntBASIC18.59■□□□□ 0.57
DDX11Q96FC9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 AL033527.5-202ENST00000641632 1098 ntBASIC18.59■□□□□ 0.57
DDX11Q96FC9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX11Q96FC9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 AC022532.1-201ENST00000624563 1728 ntBASIC18.59■□□□□ 0.57
DDX11Q96FC9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX11Q96FC9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX11Q96FC9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.59■□□□□ 0.57
DDX11Q96FC9 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX11Q96FC9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX11Q96FC9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX11Q96FC9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX11Q96FC9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.58■□□□□ 0.57
DDX11Q96FC9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX11Q96FC9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.58■□□□□ 0.57
DDX11Q96FC9 KRT8P37-201ENST00000451609 1420 ntBASIC18.58■□□□□ 0.57
DDX11Q96FC9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
DDX11Q96FC9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.58■□□□□ 0.57
DDX11Q96FC9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.58■□□□□ 0.57
DDX11Q96FC9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.58■□□□□ 0.57
DDX11Q96FC9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DDX11Q96FC9 AL391825.1-201ENST00000457671 1364 ntBASIC18.58■□□□□ 0.57
DDX11Q96FC9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DDX11Q96FC9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
DDX11Q96FC9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX11Q96FC9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX11Q96FC9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DDX11Q96FC9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DDX11Q96FC9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DDX11Q96FC9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
DDX11Q96FC9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX11Q96FC9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DDX11Q96FC9 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
DDX11Q96FC9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX11Q96FC9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DDX11Q96FC9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.58■□□□□ 0.56
DDX11Q96FC9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.58■□□□□ 0.56
DDX11Q96FC9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.58■□□□□ 0.56
DDX11Q96FC9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX11Q96FC9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.58■□□□□ 0.56
DDX11Q96FC9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX11Q96FC9 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.58■□□□□ 0.56
DDX11Q96FC9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.58■□□□□ 0.56
DDX11Q96FC9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX11Q96FC9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX11Q96FC9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
DDX11Q96FC9 AC087481.3-201ENST00000602886 1894 ntBASIC18.58■□□□□ 0.56
DDX11Q96FC9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
DDX11Q96FC9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms