Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 KRT18P58-201ENST00000527480 1120 ntBASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 KRT8P23-201ENST00000560090 1207 ntBASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 AL450472.2-201ENST00000603663 1156 ntBASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 C18orf15-201ENST00000623680 2534 ntBASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 CICP14-201ENST00000629111 2732 ntBASIC16.6■□□□□ 0.25
CCDC50Q8IVM0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 AC127383.1-201ENST00000444697 1800 ntBASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 MIR346-201ENST00000362234 95 ntBASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 AL592309.1-201ENST00000443127 649 ntBASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 ACTG1P14-201ENST00000446382 1122 ntBASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 SLC25A39P2-201ENST00000537614 270 ntBASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 AC026979.3-201ENST00000607315 403 ntBASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 C20orf181-201ENST00000623918 480 ntBASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 KRT8P37-201ENST00000451609 1420 ntBASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCDC50Q8IVM0 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.58■□□□□ 0.25
CCDC50Q8IVM0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC50Q8IVM0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC50Q8IVM0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CCDC50Q8IVM0 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
CCDC50Q8IVM0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC50Q8IVM0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 LINC01225-203ENST00000563550 1244 ntBASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC50Q8IVM0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms