Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 AC051619.9-201ENST00000623237 597 ntBASIC12.73□□□□□ -0.37
VPS13CQ709C8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 AC144522.1-201ENST00000625111 1658 ntBASIC12.73□□□□□ -0.37
VPS13CQ709C8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VPS13CQ709C8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.73□□□□□ -0.37
VPS13CQ709C8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 AC007881.3-201ENST00000608897 607 ntBASIC12.72□□□□□ -0.37
VPS13CQ709C8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 AC097065.1-201ENST00000425737 517 ntBASIC12.72□□□□□ -0.37
VPS13CQ709C8 AC104073.2-201ENST00000453737 312 ntBASIC12.72□□□□□ -0.37
VPS13CQ709C8 NPM1P43-201ENST00000558669 786 ntBASIC12.72□□□□□ -0.37
VPS13CQ709C8 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.72□□□□□ -0.37
VPS13CQ709C8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 MIR4649-201ENST00000582839 64 ntBASIC12.72□□□□□ -0.37
VPS13CQ709C8 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.72□□□□□ -0.37
VPS13CQ709C8 AC009084.3-201ENST00000623356 437 ntBASIC12.72□□□□□ -0.37
VPS13CQ709C8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VPS13CQ709C8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.72□□□□□ -0.37
VPS13CQ709C8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 AC024909.3-201ENST00000611513 2257 ntBASIC12.71□□□□□ -0.37
VPS13CQ709C8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13CQ709C8 E2F3P2-201ENST00000447755 1422 ntBASIC12.71□□□□□ -0.37
VPS13CQ709C8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13CQ709C8 AC242376.1-201ENST00000559033 726 ntBASIC12.71□□□□□ -0.37
VPS13CQ709C8 AP001002.3-201ENST00000623482 206 ntBASIC12.71□□□□□ -0.37
VPS13CQ709C8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13CQ709C8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13CQ709C8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13CQ709C8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13CQ709C8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13CQ709C8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13CQ709C8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13CQ709C8 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13CQ709C8 AC007274.2-201ENST00000421675 662 ntBASIC12.71□□□□□ -0.37
VPS13CQ709C8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 CHMP1AP1-201ENST00000445563 662 ntBASIC12.71□□□□□ -0.37
VPS13CQ709C8 FGFR3P1-201ENST00000449999 601 ntBASIC12.71□□□□□ -0.37
VPS13CQ709C8 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 RTN3P1-201ENST00000536295 711 ntBASIC12.71□□□□□ -0.37
VPS13CQ709C8 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.71□□□□□ -0.37
VPS13CQ709C8 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VPS13CQ709C8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms