Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 MEIS3P1-201ENST00000495167 958 ntBASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 AP005117.1-202ENST00000581724 1908 ntBASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RFWD3Q6PCD5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 PRAL-201ENST00000624952 3286 ntBASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 TP53TG3HP-202ENST00000569755 579 ntBASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 AC140912.1-201ENST00000577171 1054 ntBASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFWD3Q6PCD5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 FAM45BP-202ENST00000592932 1624 ntBASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 AC055876.2-201ENST00000531834 546 ntBASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 MIR4313-201ENST00000580760 101 ntBASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 AC008494.3-201ENST00000606615 944 ntBASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 AC007431.3-201ENST00000623221 587 ntBASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms