Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.97□□□□□ -0.17
SRP9P49458 AC027307.2-201ENST00000591252 911 ntBASIC13.97□□□□□ -0.17
SRP9P49458 AC004835.2-201ENST00000603762 682 ntBASIC13.97□□□□□ -0.17
SRP9P49458 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.97□□□□□ -0.17
SRP9P49458 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.97□□□□□ -0.17
SRP9P49458 AC105339.1-204ENST00000636249 355 ntBASIC13.97□□□□□ -0.17
SRP9P49458 AC134684.3-201ENST00000641758 218 ntBASIC13.97□□□□□ -0.17
SRP9P49458 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SRP9P49458 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.97□□□□□ -0.17
SRP9P49458 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SRP9P49458 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 AGAP7P-201ENST00000582299 2062 ntBASIC13.97□□□□□ -0.17
SRP9P49458 AGAP14-201ENST00000624701 2060 ntBASIC13.97□□□□□ -0.17
SRP9P49458 CICP14-201ENST00000629111 2732 ntBASIC13.97□□□□□ -0.17
SRP9P49458 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.97□□□□□ -0.17
SRP9P49458 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SRP9P49458 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.97□□□□□ -0.17
SRP9P49458 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRP9P49458 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SRP9P49458 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SRP9P49458 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SRP9P49458 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 AC015656.1-201ENST00000624209 3578 ntBASIC13.96□□□□□ -0.17
SRP9P49458 C18orf15-201ENST00000623680 2534 ntBASIC13.96□□□□□ -0.17
SRP9P49458 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
SRP9P49458 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.96□□□□□ -0.17
SRP9P49458 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SRP9P49458 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 AC105250.1-201ENST00000509378 2057 ntBASIC13.96□□□□□ -0.17
SRP9P49458 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.96□□□□□ -0.17
SRP9P49458 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.96□□□□□ -0.17
SRP9P49458 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SRP9P49458 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SRP9P49458 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.96□□□□□ -0.17
SRP9P49458 AC005237.2-201ENST00000434368 219 ntBASIC13.96□□□□□ -0.17
SRP9P49458 AP006288.1-201ENST00000446065 395 ntBASIC13.96□□□□□ -0.17
SRP9P49458 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.96□□□□□ -0.17
SRP9P49458 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SRP9P49458 KRT8P48-201ENST00000515599 1220 ntBASIC13.96□□□□□ -0.17
SRP9P49458 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.96□□□□□ -0.17
SRP9P49458 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.96□□□□□ -0.17
SRP9P49458 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.96□□□□□ -0.17
SRP9P49458 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.96□□□□□ -0.17
SRP9P49458 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.96□□□□□ -0.17
SRP9P49458 AC243562.1-201ENST00000560672 389 ntBASIC13.96□□□□□ -0.17
SRP9P49458 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.96□□□□□ -0.17
SRP9P49458 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.96□□□□□ -0.17
SRP9P49458 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.96□□□□□ -0.17
SRP9P49458 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 AL691403.2-201ENST00000618460 490 ntBASIC13.96□□□□□ -0.17
SRP9P49458 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SRP9P49458 AL513210.1-201ENST00000629608 234 ntBASIC13.96□□□□□ -0.17
SRP9P49458 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.96□□□□□ -0.17
SRP9P49458 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.96□□□□□ -0.17
SRP9P49458 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRP9P49458 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.96□□□□□ -0.17
SRP9P49458 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SRP9P49458 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SRP9P49458 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SRP9P49458 AC073439.1-201ENST00000624121 1774 ntBASIC13.96□□□□□ -0.18
SRP9P49458 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SRP9P49458 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.96□□□□□ -0.18
SRP9P49458 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SRP9P49458 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SRP9P49458 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRP9P49458 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.95□□□□□ -0.18
SRP9P49458 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
SRP9P49458 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.95□□□□□ -0.18
SRP9P49458 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRP9P49458 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRP9P49458 U82695.1-201ENST00000635752 1889 ntBASIC13.95□□□□□ -0.18
SRP9P49458 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.95□□□□□ -0.18
SRP9P49458 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRP9P49458 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRP9P49458 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRP9P49458 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRP9P49458 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.95□□□□□ -0.18
SRP9P49458 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRP9P49458 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRP9P49458 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRP9P49458 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SRP9P49458 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRP9P49458 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms