Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1A1P48729 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.18
CSNK1A1P48729 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1A1P48729 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1A1P48729 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1A1P48729 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CSNK1A1P48729 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CSNK1A1P48729 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1A1P48729 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CSNK1A1P48729 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CSNK1A1P48729 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 AC022532.1-201ENST00000624563 1728 ntBASIC13.95□□□□□ -0.18
CSNK1A1P48729 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 PMS2P2-201ENST00000425039 1128 ntBASIC13.95□□□□□ -0.18
CSNK1A1P48729 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 AL590560.3-201ENST00000623350 461 ntBASIC13.95□□□□□ -0.18
CSNK1A1P48729 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 AL109936.8-201ENST00000641772 604 ntBASIC13.95□□□□□ -0.18
CSNK1A1P48729 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CSNK1A1P48729 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.95□□□□□ -0.18
CSNK1A1P48729 AC073347.1-201ENST00000421633 2643 ntBASIC13.94□□□□□ -0.18
CSNK1A1P48729 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 AC074338.1-201ENST00000416825 156 ntBASIC13.94□□□□□ -0.18
CSNK1A1P48729 AC055876.3-201ENST00000431496 288 ntBASIC13.94□□□□□ -0.18
CSNK1A1P48729 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms