Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.47■□□□□ 0.07
VARSP26640 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
VARSP26640 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.47■□□□□ 0.07
VARSP26640 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 TSPY16P-201ENST00000449843 468 ntBASIC15.47■□□□□ 0.07
VARSP26640 AL139010.1-201ENST00000454878 894 ntBASIC15.47■□□□□ 0.07
VARSP26640 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.47■□□□□ 0.07
VARSP26640 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.47■□□□□ 0.07
VARSP26640 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.47■□□□□ 0.07
VARSP26640 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.47■□□□□ 0.07
VARSP26640 BANF1P1-201ENST00000553684 263 ntBASIC15.47■□□□□ 0.07
VARSP26640 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.47■□□□□ 0.07
VARSP26640 CYP4F24P-201ENST00000586049 1580 ntBASIC15.47■□□□□ 0.07
VARSP26640 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.47■□□□□ 0.07
VARSP26640 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.47■□□□□ 0.07
VARSP26640 AC010326.4-201ENST00000604665 891 ntBASIC15.47■□□□□ 0.07
VARSP26640 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.47■□□□□ 0.07
VARSP26640 TMBIM7P-203ENST00000641617 1718 ntBASIC15.47■□□□□ 0.07
VARSP26640 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.47■□□□□ 0.07
VARSP26640 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.47■□□□□ 0.07
VARSP26640 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
VARSP26640 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.47■□□□□ 0.07
VARSP26640 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
VARSP26640 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.47■□□□□ 0.07
VARSP26640 AC139749.1-202ENST00000617529 3139 ntBASIC15.47■□□□□ 0.07
VARSP26640 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.47■□□□□ 0.07
VARSP26640 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
VARSP26640 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VARSP26640 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.46■□□□□ 0.07
VARSP26640 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
VARSP26640 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
VARSP26640 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.46■□□□□ 0.07
VARSP26640 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
VARSP26640 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 AC015656.1-201ENST00000624209 3578 ntBASIC15.46■□□□□ 0.07
VARSP26640 NORAD-201ENST00000565493 5339 ntBASIC15.46■□□□□ 0.07
VARSP26640 GK-202ENST00000378941 458 ntTSL 3 BASIC15.46■□□□□ 0.07
VARSP26640 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.46■□□□□ 0.07
VARSP26640 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.46■□□□□ 0.07
VARSP26640 AC125807.1-201ENST00000483097 614 ntBASIC15.46■□□□□ 0.07
VARSP26640 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.46■□□□□ 0.07
VARSP26640 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.46■□□□□ 0.07
VARSP26640 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.46■□□□□ 0.07
VARSP26640 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.46■□□□□ 0.07
VARSP26640 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.46■□□□□ 0.07
VARSP26640 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
VARSP26640 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.46■□□□□ 0.07
VARSP26640 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARSP26640 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
VARSP26640 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
VARSP26640 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.46■□□□□ 0.06
VARSP26640 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
VARSP26640 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
VARSP26640 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
VARSP26640 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
VARSP26640 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
VARSP26640 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
VARSP26640 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
VARSP26640 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
VARSP26640 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
VARSP26640 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
VARSP26640 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.45■□□□□ 0.06
VARSP26640 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VARSP26640 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARSP26640 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARSP26640 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARSP26640 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VARSP26640 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
VARSP26640 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARSP26640 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.45■□□□□ 0.06
VARSP26640 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.45■□□□□ 0.06
VARSP26640 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
VARSP26640 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.45■□□□□ 0.06
VARSP26640 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms