Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TNFSF4P23510 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.43□□□□□ -0.26
TNFSF4P23510 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TNFSF4P23510 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.43□□□□□ -0.26
TNFSF4P23510 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.43□□□□□ -0.26
TNFSF4P23510 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.43□□□□□ -0.26
TNFSF4P23510 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.43□□□□□ -0.26
TNFSF4P23510 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.43□□□□□ -0.26
TNFSF4P23510 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TNFSF4P23510 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.43□□□□□ -0.26
TNFSF4P23510 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.43□□□□□ -0.26
TNFSF4P23510 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.43□□□□□ -0.26
TNFSF4P23510 AC008738.7-201ENST00000609744 511 ntBASIC13.43□□□□□ -0.26
TNFSF4P23510 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TNFSF4P23510 AC004461.2-201ENST00000629517 803 ntBASIC13.43□□□□□ -0.26
TNFSF4P23510 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TNFSF4P23510 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.43□□□□□ -0.26
TNFSF4P23510 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
TNFSF4P23510 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
TNFSF4P23510 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.43□□□□□ -0.26
TNFSF4P23510 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.43□□□□□ -0.26
TNFSF4P23510 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 AP003680.1-201ENST00000598970 3660 ntBASIC13.43□□□□□ -0.26
TNFSF4P23510 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TNFSF4P23510 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TNFSF4P23510 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.42□□□□□ -0.26
TNFSF4P23510 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
TNFSF4P23510 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TNFSF4P23510 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.42□□□□□ -0.26
TNFSF4P23510 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.42□□□□□ -0.26
TNFSF4P23510 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TNFSF4P23510 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TNFSF4P23510 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TNFSF4P23510 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.42□□□□□ -0.26
TNFSF4P23510 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TNFSF4P23510 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 SBF1P1-201ENST00000444527 5631 ntBASIC13.42□□□□□ -0.26
TNFSF4P23510 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.42□□□□□ -0.26
TNFSF4P23510 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.42□□□□□ -0.26
TNFSF4P23510 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.42□□□□□ -0.26
TNFSF4P23510 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.42□□□□□ -0.26
TNFSF4P23510 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.42□□□□□ -0.26
TNFSF4P23510 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.42□□□□□ -0.26
TNFSF4P23510 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.42□□□□□ -0.26
TNFSF4P23510 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 DOC2GP-202ENST00000514950 1163 ntBASIC13.42□□□□□ -0.26
TNFSF4P23510 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
TNFSF4P23510 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.42□□□□□ -0.26
TNFSF4P23510 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.42□□□□□ -0.26
TNFSF4P23510 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.42□□□□□ -0.26
TNFSF4P23510 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.42□□□□□ -0.26
TNFSF4P23510 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.42□□□□□ -0.26
TNFSF4P23510 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.42□□□□□ -0.26
TNFSF4P23510 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TNFSF4P23510 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.42□□□□□ -0.26
TNFSF4P23510 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
TNFSF4P23510 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
TNFSF4P23510 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.42□□□□□ -0.26
TNFSF4P23510 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.42□□□□□ -0.26
TNFSF4P23510 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TNFSF4P23510 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TNFSF4P23510 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms