Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 DIO1-215ENST00000610607 796 ntTSL 5 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 AC244157.2-201ENST00000616239 1006 ntBASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 MFF-204ENST00000353339 2186 ntTSL 5 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 AC080080.1-201ENST00000625121 2420 ntBASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 CYP46A4P-201ENST00000414953 267 ntBASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 AC044849.1-201ENST00000519737 1188 ntBASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 MIR3619-201ENST00000579667 83 ntBASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSB-PGBD3P0DP91 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.87
CSB-PGBD3P0DP91 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.87
CSB-PGBD3P0DP91 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CSB-PGBD3P0DP91 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 NKAIN1P1-201ENST00000435754 582 ntBASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 RN7SL769P-201ENST00000469386 295 ntBASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 CHMP4BP1-201ENST00000556017 588 ntBASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 PPY2P-201ENST00000582808 702 ntBASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 AC138649.2-201ENST00000615886 705 ntBASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSB-PGBD3P0DP91 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 AC016700.1-201ENST00000429424 312 ntBASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 IMP3P2-201ENST00000489760 475 ntBASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 INO80C-210ENST00000590757 595 ntTSL 2 BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSB-PGBD3P0DP91 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms