Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.68■□□□□ 0.26
FAM228BP0C875 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.68■□□□□ 0.26
FAM228BP0C875 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.68■□□□□ 0.26
FAM228BP0C875 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM228BP0C875 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FAM228BP0C875 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.68■□□□□ 0.26
FAM228BP0C875 AP000347.1-202ENST00000435868 847 ntBASIC16.68■□□□□ 0.26
FAM228BP0C875 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.68■□□□□ 0.26
FAM228BP0C875 MTND6P24-201ENST00000440466 518 ntBASIC16.68■□□□□ 0.26
FAM228BP0C875 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.68■□□□□ 0.26
FAM228BP0C875 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.68■□□□□ 0.26
FAM228BP0C875 DNAJB3-201ENST00000446806 729 ntBASIC16.68■□□□□ 0.26
FAM228BP0C875 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM228BP0C875 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.68■□□□□ 0.26
FAM228BP0C875 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.68■□□□□ 0.26
FAM228BP0C875 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.68■□□□□ 0.26
FAM228BP0C875 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
FAM228BP0C875 MIR4453-201ENST00000584019 89 ntBASIC16.68■□□□□ 0.26
FAM228BP0C875 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
FAM228BP0C875 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.68■□□□□ 0.26
FAM228BP0C875 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
FAM228BP0C875 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FAM228BP0C875 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.68■□□□□ 0.26
FAM228BP0C875 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FAM228BP0C875 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FAM228BP0C875 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 AL035456.1-201ENST00000456064 1369 ntBASIC16.67■□□□□ 0.26
FAM228BP0C875 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FAM228BP0C875 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
FAM228BP0C875 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
FAM228BP0C875 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.67■□□□□ 0.26
FAM228BP0C875 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
FAM228BP0C875 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.67■□□□□ 0.26
FAM228BP0C875 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.67■□□□□ 0.26
FAM228BP0C875 AP000344.2-201ENST00000512987 629 ntBASIC16.67■□□□□ 0.26
FAM228BP0C875 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
FAM228BP0C875 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
FAM228BP0C875 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.67■□□□□ 0.26
FAM228BP0C875 AC009093.7-201ENST00000623853 1223 ntBASIC16.67■□□□□ 0.26
FAM228BP0C875 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 ACE3P-201ENST00000423435 1973 ntBASIC16.67■□□□□ 0.26
FAM228BP0C875 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.67■□□□□ 0.26
FAM228BP0C875 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.67■□□□□ 0.26
FAM228BP0C875 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.67■□□□□ 0.26
FAM228BP0C875 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
FAM228BP0C875 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM228BP0C875 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
FAM228BP0C875 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
FAM228BP0C875 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
FAM228BP0C875 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.66■□□□□ 0.26
FAM228BP0C875 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
FAM228BP0C875 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.66■□□□□ 0.26
FAM228BP0C875 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 WASH3P-207ENST00000560956 1394 ntBASIC16.66■□□□□ 0.26
FAM228BP0C875 FO538757.1-201ENST00000623083 1397 ntBASIC16.66■□□□□ 0.26
FAM228BP0C875 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.66■□□□□ 0.26
FAM228BP0C875 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.66■□□□□ 0.26
FAM228BP0C875 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.66■□□□□ 0.26
FAM228BP0C875 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
FAM228BP0C875 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.66■□□□□ 0.26
FAM228BP0C875 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
FAM228BP0C875 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
FAM228BP0C875 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.66■□□□□ 0.26
FAM228BP0C875 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM228BP0C875 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.66■□□□□ 0.26
FAM228BP0C875 AC112482.1-201ENST00000492080 688 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms