Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm9083-201ENSMUST00000120423 819 ntBASIC12.37□□□□□ -0.43
Hoxa4P06798 Gm15547-201ENSMUST00000122152 333 ntBASIC12.37□□□□□ -0.43
Hoxa4P06798 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hoxa4P06798 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hoxa4P06798 Gm42937-201ENSMUST00000197360 752 ntBASIC12.37□□□□□ -0.43
Hoxa4P06798 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hoxa4P06798 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hoxa4P06798 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hoxa4P06798 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hoxa4P06798 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hoxa4P06798 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.37□□□□□ -0.43
Hoxa4P06798 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.37□□□□□ -0.43
Hoxa4P06798 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hoxa4P06798 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hoxa4P06798 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Hoxa4P06798 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Hoxa4P06798 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.36□□□□□ -0.43
Hoxa4P06798 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.36□□□□□ -0.43
Hoxa4P06798 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.36□□□□□ -0.43
Hoxa4P06798 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Gm24845-201ENSMUST00000158034 109 ntBASIC12.36□□□□□ -0.43
Hoxa4P06798 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.36□□□□□ -0.43
Hoxa4P06798 Gm8885-201ENSMUST00000189382 598 ntBASIC12.36□□□□□ -0.43
Hoxa4P06798 Gm44124-201ENSMUST00000204159 472 ntBASIC12.36□□□□□ -0.43
Hoxa4P06798 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.36□□□□□ -0.43
Hoxa4P06798 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.36□□□□□ -0.43
Hoxa4P06798 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.36□□□□□ -0.43
Hoxa4P06798 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.36□□□□□ -0.43
Hoxa4P06798 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Hoxa4P06798 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hoxa4P06798 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Hoxa4P06798 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Hoxa4P06798 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxa4P06798 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hoxa4P06798 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hoxa4P06798 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.35□□□□□ -0.43
Hoxa4P06798 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hoxa4P06798 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Hoxa4P06798 Gm23270-201ENSMUST00000104055 131 ntBASIC12.35□□□□□ -0.43
Hoxa4P06798 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.35□□□□□ -0.43
Hoxa4P06798 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.35□□□□□ -0.43
Hoxa4P06798 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.35□□□□□ -0.43
Hoxa4P06798 Gm14381-201ENSMUST00000122105 414 ntBASIC12.35□□□□□ -0.43
Hoxa4P06798 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Gm20482-202ENSMUST00000174729 825 ntBASIC12.35□□□□□ -0.43
Hoxa4P06798 Gm3096-201ENSMUST00000185770 364 ntBASIC12.35□□□□□ -0.43
Hoxa4P06798 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.35□□□□□ -0.43
Hoxa4P06798 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.35□□□□□ -0.43
Hoxa4P06798 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Gm8712-201ENSMUST00000221090 701 ntBASIC12.35□□□□□ -0.43
Hoxa4P06798 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.35□□□□□ -0.43
Hoxa4P06798 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxa4P06798 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms