Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.79■□□□□ 0.6
APPP05067 TOMM22P5-201ENST00000416399 439 ntBASIC18.79■□□□□ 0.6
APPP05067 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.79■□□□□ 0.6
APPP05067 AC055876.2-201ENST00000531834 546 ntBASIC18.79■□□□□ 0.6
APPP05067 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.79■□□□□ 0.6
APPP05067 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
APPP05067 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 RARRES2P5-201ENST00000564013 466 ntBASIC18.79■□□□□ 0.6
APPP05067 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.79■□□□□ 0.6
APPP05067 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.79■□□□□ 0.6
APPP05067 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.79■□□□□ 0.6
APPP05067 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
APPP05067 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.79■□□□□ 0.6
APPP05067 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 AL391825.1-201ENST00000457671 1364 ntBASIC18.79■□□□□ 0.6
APPP05067 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
APPP05067 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
APPP05067 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.79■□□□□ 0.6
APPP05067 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.78■□□□□ 0.6
APPP05067 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.78■□□□□ 0.6
APPP05067 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.78■□□□□ 0.6
APPP05067 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
APPP05067 AC007950.2-201ENST00000615045 2347 ntBASIC18.78■□□□□ 0.6
APPP05067 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
APPP05067 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.78■□□□□ 0.6
APPP05067 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.78■□□□□ 0.6
APPP05067 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.78■□□□□ 0.6
APPP05067 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.78■□□□□ 0.6
APPP05067 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.78■□□□□ 0.6
APPP05067 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.78■□□□□ 0.6
APPP05067 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.78■□□□□ 0.6
APPP05067 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.78■□□□□ 0.6
APPP05067 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
APPP05067 AL158212.4-201ENST00000624062 1286 ntBASIC18.78■□□□□ 0.6
APPP05067 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.78■□□□□ 0.6
APPP05067 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.78■□□□□ 0.6
APPP05067 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.78■□□□□ 0.6
APPP05067 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
APPP05067 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APPP05067 AC138969.3-201ENST00000546612 1459 ntBASIC18.77■□□□□ 0.6
APPP05067 AC138932.2-201ENST00000548268 1459 ntBASIC18.77■□□□□ 0.6
APPP05067 AC126755.4-201ENST00000549796 1459 ntBASIC18.77■□□□□ 0.6
APPP05067 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
APPP05067 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
APPP05067 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.77■□□□□ 0.6
APPP05067 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APPP05067 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
APPP05067 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APPP05067 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APPP05067 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.77■□□□□ 0.6
APPP05067 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APPP05067 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.77■□□□□ 0.6
APPP05067 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
APPP05067 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APPP05067 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
APPP05067 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APPP05067 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.77■□□□□ 0.6
APPP05067 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
APPP05067 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APPP05067 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.77■□□□□ 0.6
APPP05067 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.77■□□□□ 0.6
APPP05067 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.77■□□□□ 0.6
APPP05067 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.77■□□□□ 0.6
APPP05067 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.77■□□□□ 0.6
APPP05067 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
APPP05067 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.77■□□□□ 0.6
APPP05067 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
APPP05067 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.77■□□□□ 0.6
APPP05067 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.77■□□□□ 0.6
APPP05067 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.59
APPP05067 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.77■□□□□ 0.59
APPP05067 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
APPP05067 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
APPP05067 TSPY26P-202ENST00000565928 3884 ntBASIC18.76■□□□□ 0.59
APPP05067 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
APPP05067 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
APPP05067 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms