Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
UPK2O00526 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
UPK2O00526 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 AL035456.1-201ENST00000456064 1369 ntBASIC12.57□□□□□ -0.4
UPK2O00526 KRT8P12-202ENST00000472924 1397 ntBASIC12.57□□□□□ -0.4
UPK2O00526 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 AC084364.1-201ENST00000551967 1556 ntBASIC12.57□□□□□ -0.4
UPK2O00526 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.57□□□□□ -0.4
UPK2O00526 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
UPK2O00526 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.57□□□□□ -0.4
UPK2O00526 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.57□□□□□ -0.4
UPK2O00526 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 YBX1P5-201ENST00000509441 847 ntBASIC12.57□□□□□ -0.4
UPK2O00526 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 AC093520.2-201ENST00000561830 333 ntBASIC12.57□□□□□ -0.4
UPK2O00526 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 MIR4469-201ENST00000583919 79 ntBASIC12.57□□□□□ -0.4
UPK2O00526 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.57□□□□□ -0.4
UPK2O00526 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
UPK2O00526 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
UPK2O00526 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 AL133215.2-201ENST00000609242 977 ntBASIC12.57□□□□□ -0.4
UPK2O00526 AC007967.4-201ENST00000614700 386 ntBASIC12.57□□□□□ -0.4
UPK2O00526 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.57□□□□□ -0.4
UPK2O00526 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
UPK2O00526 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.57□□□□□ -0.4
UPK2O00526 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.57□□□□□ -0.4
UPK2O00526 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
UPK2O00526 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.57□□□□□ -0.4
UPK2O00526 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.57□□□□□ -0.4
UPK2O00526 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.57□□□□□ -0.4
UPK2O00526 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.57□□□□□ -0.4
UPK2O00526 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UPK2O00526 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 ZBED1P1-201ENST00000502364 1930 ntBASIC12.56□□□□□ -0.4
UPK2O00526 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
UPK2O00526 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.56□□□□□ -0.4
UPK2O00526 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.56□□□□□ -0.4
UPK2O00526 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
UPK2O00526 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 AC097376.2-205ENST00000610159 5334 ntBASIC12.56□□□□□ -0.4
UPK2O00526 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
UPK2O00526 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UPK2O00526 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms