Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NFKBIEO00221 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.47■□□□□ 0.55
NFKBIEO00221 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.47■□□□□ 0.55
NFKBIEO00221 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NFKBIEO00221 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NFKBIEO00221 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NFKBIEO00221 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.46■□□□□ 0.55
NFKBIEO00221 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 AC239868.1-201ENST00000369385 493 ntBASIC18.46■□□□□ 0.55
NFKBIEO00221 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.46■□□□□ 0.55
NFKBIEO00221 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.46■□□□□ 0.55
NFKBIEO00221 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.46■□□□□ 0.55
NFKBIEO00221 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
NFKBIEO00221 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.46■□□□□ 0.55
NFKBIEO00221 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.46■□□□□ 0.55
NFKBIEO00221 MEG3_2.1-201ENST00000611456 105 ntBASIC18.46■□□□□ 0.55
NFKBIEO00221 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NFKBIEO00221 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
NFKBIEO00221 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.46■□□□□ 0.55
NFKBIEO00221 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.46■□□□□ 0.55
NFKBIEO00221 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NFKBIEO00221 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NFKBIEO00221 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NFKBIEO00221 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NFKBIEO00221 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.46■□□□□ 0.54
NFKBIEO00221 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
NFKBIEO00221 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
NFKBIEO00221 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
NFKBIEO00221 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKBIEO00221 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKBIEO00221 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKBIEO00221 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NFKBIEO00221 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
NFKBIEO00221 FAM90A7P-201ENST00000382628 1395 ntBASIC18.45■□□□□ 0.54
NFKBIEO00221 FAM90A23P-201ENST00000400136 1395 ntBASIC18.45■□□□□ 0.54
NFKBIEO00221 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NFKBIEO00221 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.45■□□□□ 0.54
NFKBIEO00221 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.45■□□□□ 0.54
NFKBIEO00221 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.45■□□□□ 0.54
NFKBIEO00221 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.45■□□□□ 0.54
NFKBIEO00221 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.45■□□□□ 0.54
NFKBIEO00221 AC026803.1-201ENST00000569130 274 ntBASIC18.45■□□□□ 0.54
NFKBIEO00221 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.45■□□□□ 0.54
NFKBIEO00221 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.45■□□□□ 0.54
NFKBIEO00221 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.45■□□□□ 0.54
NFKBIEO00221 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.45■□□□□ 0.54
NFKBIEO00221 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.45■□□□□ 0.54
NFKBIEO00221 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.45■□□□□ 0.54
NFKBIEO00221 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKBIEO00221 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKBIEO00221 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NFKBIEO00221 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKBIEO00221 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NFKBIEO00221 AC084364.1-201ENST00000551967 1556 ntBASIC18.45■□□□□ 0.54
NFKBIEO00221 INE2-201ENST00000630399 1874 ntBASIC18.45■□□□□ 0.54
NFKBIEO00221 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NFKBIEO00221 AC020916.1-201ENST00000587762 1774 ntBASIC18.45■□□□□ 0.54
NFKBIEO00221 MBLAC2-202ENST00000514906 1936 ntBASIC18.45■□□□□ 0.54
NFKBIEO00221 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NFKBIEO00221 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKBIEO00221 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NFKBIEO00221 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NFKBIEO00221 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKBIEO00221 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
NFKBIEO00221 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NFKBIEO00221 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKBIEO00221 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NFKBIEO00221 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
NFKBIEO00221 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.44■□□□□ 0.54
NFKBIEO00221 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.44■□□□□ 0.54
NFKBIEO00221 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NFKBIEO00221 AP000356.3-201ENST00000382243 753 ntBASIC18.44■□□□□ 0.54
NFKBIEO00221 RPL8P2-201ENST00000430538 502 ntBASIC18.44■□□□□ 0.54
NFKBIEO00221 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.44■□□□□ 0.54
NFKBIEO00221 PIN4P1-201ENST00000451079 396 ntBASIC18.44■□□□□ 0.54
NFKBIEO00221 RN7SL258P-201ENST00000478664 300 ntBASIC18.44■□□□□ 0.54
NFKBIEO00221 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.44■□□□□ 0.54
NFKBIEO00221 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms