Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DENND2AQ9ULE3 HYMAI-201ENST00000635591 3347 ntBASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 KLF2P4-201ENST00000451959 1225 ntBASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 CTBP2P5-201ENST00000454986 1264 ntBASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DENND2AQ9ULE3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DENND2AQ9ULE3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.83■□□□□ 0.61
DENND2AQ9ULE3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DENND2AQ9ULE3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DENND2AQ9ULE3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.83■□□□□ 0.61
DENND2AQ9ULE3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
DENND2AQ9ULE3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.83■□□□□ 0.61
DENND2AQ9ULE3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.83■□□□□ 0.61
DENND2AQ9ULE3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.83■□□□□ 0.61
DENND2AQ9ULE3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DENND2AQ9ULE3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
DENND2AQ9ULE3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DENND2AQ9ULE3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
DENND2AQ9ULE3 AC009090.5-201ENST00000624886 2285 ntBASIC18.83■□□□□ 0.61
DENND2AQ9ULE3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 AC007551.1-201ENST00000457394 519 ntBASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 FTH1P14-201ENST00000482930 551 ntBASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 AC106760.1-201ENST00000508690 800 ntBASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 AP005019.2-201ENST00000615104 511 ntBASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DENND2AQ9ULE3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms