Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 AC005089.1-201ENST00000619486 2241 ntBASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC23.61■■□□□ 1.37
SCAF1Q9H7N4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 CT45A11P-201ENST00000448043 1134 ntBASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 AL844908.2-201ENST00000609461 460 ntBASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 AC087499.5-201ENST00000452760 1342 ntBASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCAF1Q9H7N4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 TEX28P1-201ENST00000613479 1221 ntBASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 AL118556.2-201ENST00000614375 824 ntBASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 TEX28P2-201ENST00000617764 1221 ntBASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SCAF1Q9H7N4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms