Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.05■□□□□ -0
PIF1Q9H611 AC025580.3-201ENST00000617932 1424 ntBASIC15.05■□□□□ -0
PIF1Q9H611 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PIF1Q9H611 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PIF1Q9H611 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.05■□□□□ -0
PIF1Q9H611 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PIF1Q9H611 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PIF1Q9H611 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.05■□□□□ -0
PIF1Q9H611 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.05■□□□□ -0
PIF1Q9H611 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.05■□□□□ -0
PIF1Q9H611 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PIF1Q9H611 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PIF1Q9H611 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PIF1Q9H611 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PIF1Q9H611 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.05■□□□□ -0
PIF1Q9H611 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PIF1Q9H611 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
PIF1Q9H611 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PIF1Q9H611 REXO1L1P-202ENST00000608646 1974 ntBASIC15.04■□□□□ -0
PIF1Q9H611 AC023024.2-201ENST00000623561 1993 ntBASIC15.04■□□□□ -0
PIF1Q9H611 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.04■□□□□ -0
PIF1Q9H611 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.04■□□□□ -0
PIF1Q9H611 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.04■□□□□ -0
PIF1Q9H611 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.04■□□□□ -0
PIF1Q9H611 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PIF1Q9H611 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 BCAR1-209ENST00000546196 1340 ntBASIC15.04■□□□□ -0
PIF1Q9H611 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PIF1Q9H611 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.04■□□□□ -0
PIF1Q9H611 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.04■□□□□ -0
PIF1Q9H611 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.04■□□□□ -0
PIF1Q9H611 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.04■□□□□ -0
PIF1Q9H611 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.04■□□□□ -0
PIF1Q9H611 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.04■□□□□ -0
PIF1Q9H611 AC018845.2-201ENST00000568326 409 ntBASIC15.04■□□□□ -0
PIF1Q9H611 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.04■□□□□ -0
PIF1Q9H611 FAM197Y3-203ENST00000618346 717 ntBASIC15.04■□□□□ -0
PIF1Q9H611 AC007064.4-201ENST00000637740 555 ntBASIC15.04■□□□□ -0
PIF1Q9H611 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.04■□□□□ -0
PIF1Q9H611 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.04■□□□□ -0
PIF1Q9H611 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.04■□□□□ -0
PIF1Q9H611 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PIF1Q9H611 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.04■□□□□ -0
PIF1Q9H611 AL359258.3-201ENST00000622910 2331 ntBASIC15.04■□□□□ -0
PIF1Q9H611 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PIF1Q9H611 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PIF1Q9H611 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.04■□□□□ -0
PIF1Q9H611 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
PIF1Q9H611 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.03■□□□□ -0
PIF1Q9H611 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 AC148477.4-201ENST00000613430 1793 ntBASIC15.03■□□□□ -0
PIF1Q9H611 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.03■□□□□ -0
PIF1Q9H611 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.03■□□□□ -0
PIF1Q9H611 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.03■□□□□ -0
PIF1Q9H611 AC104109.2-201ENST00000602919 1418 ntBASIC15.03■□□□□ -0
PIF1Q9H611 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 KRT8P44-201ENST00000441609 1350 ntBASIC15.03■□□□□ -0
PIF1Q9H611 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.03■□□□□ -0
PIF1Q9H611 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.03■□□□□ -0
PIF1Q9H611 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms