Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.02□□□□□ -0.17
LRRC28Q86X40 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LRRC28Q86X40 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRC28Q86X40 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC28Q86X40 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRC28Q86X40 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 KRT8P44-201ENST00000441609 1350 ntBASIC14.01□□□□□ -0.17
LRRC28Q86X40 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.01□□□□□ -0.17
LRRC28Q86X40 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.01□□□□□ -0.17
LRRC28Q86X40 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRC28Q86X40 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRC28Q86X40 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14□□□□□ -0.17
LRRC28Q86X40 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRRC28Q86X40 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRRC28Q86X40 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14□□□□□ -0.17
LRRC28Q86X40 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
LRRC28Q86X40 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14□□□□□ -0.17
LRRC28Q86X40 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14□□□□□ -0.17
LRRC28Q86X40 GATB-205ENST00000508611 605 ntTSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRRC28Q86X40 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14□□□□□ -0.17
LRRC28Q86X40 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14□□□□□ -0.17
LRRC28Q86X40 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 AL031055.1-201ENST00000606362 631 ntBASIC14□□□□□ -0.17
LRRC28Q86X40 AC099522.2-201ENST00000607001 744 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms