Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC20.41■□□□□ 0.86
RIPK4P57078 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC20.4■□□□□ 0.86
RIPK4P57078 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RIPK4P57078 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RIPK4P57078 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RIPK4P57078 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RIPK4P57078 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 AC011495.1-201ENST00000498085 584 ntBASIC20.4■□□□□ 0.86
RIPK4P57078 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.4■□□□□ 0.86
RIPK4P57078 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.4■□□□□ 0.86
RIPK4P57078 KRT8P22-201ENST00000562317 1415 ntBASIC20.4■□□□□ 0.86
RIPK4P57078 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.4■□□□□ 0.86
RIPK4P57078 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.4■□□□□ 0.86
RIPK4P57078 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.4■□□□□ 0.86
RIPK4P57078 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC20.4■□□□□ 0.86
RIPK4P57078 AC063926.2-201ENST00000623766 1308 ntBASIC20.4■□□□□ 0.86
RIPK4P57078 AC136621.1-201ENST00000624017 2304 ntBASIC20.4■□□□□ 0.86
RIPK4P57078 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RIPK4P57078 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC20.4■□□□□ 0.86
RIPK4P57078 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC20.39■□□□□ 0.86
RIPK4P57078 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RIPK4P57078 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RIPK4P57078 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC20.39■□□□□ 0.86
RIPK4P57078 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RIPK4P57078 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RIPK4P57078 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RIPK4P57078 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC20.39■□□□□ 0.85
RIPK4P57078 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RIPK4P57078 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK4P57078 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RIPK4P57078 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RIPK4P57078 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC20.39■□□□□ 0.85
RIPK4P57078 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK4P57078 C1QBPP1-201ENST00000400117 770 ntBASIC20.39■□□□□ 0.85
RIPK4P57078 AL512384.1-201ENST00000406683 331 ntBASIC20.39■□□□□ 0.85
RIPK4P57078 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK4P57078 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC20.39■□□□□ 0.85
RIPK4P57078 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.39■□□□□ 0.85
RIPK4P57078 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.39■□□□□ 0.85
RIPK4P57078 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.39■□□□□ 0.85
RIPK4P57078 AC107373.2-201ENST00000607735 490 ntBASIC20.39■□□□□ 0.85
RIPK4P57078 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC20.39■□□□□ 0.85
RIPK4P57078 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.39■□□□□ 0.85
RIPK4P57078 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK4P57078 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK4P57078 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK4P57078 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC20.39■□□□□ 0.85
RIPK4P57078 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK4P57078 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK4P57078 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK4P57078 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RIPK4P57078 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
RIPK4P57078 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC20.38■□□□□ 0.85
RIPK4P57078 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RIPK4P57078 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RIPK4P57078 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.38■□□□□ 0.85
RIPK4P57078 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.38■□□□□ 0.85
RIPK4P57078 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
RIPK4P57078 PFN2-205ENST00000461868 613 ntTSL 2 BASIC20.38■□□□□ 0.85
RIPK4P57078 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RIPK4P57078 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
RIPK4P57078 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
RIPK4P57078 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.38■□□□□ 0.85
RIPK4P57078 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC20.38■□□□□ 0.85
RIPK4P57078 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.38■□□□□ 0.85
RIPK4P57078 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 CU634019.7-201ENST00000624153 1185 ntBASIC20.38■□□□□ 0.85
RIPK4P57078 FP236241.2-201ENST00000624906 1185 ntBASIC20.38■□□□□ 0.85
RIPK4P57078 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.38■□□□□ 0.85
RIPK4P57078 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RIPK4P57078 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms