Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
SSR1P43307 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.76■□□□□ 0.27
SSR1P43307 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SSR1P43307 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SSR1P43307 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SSR1P43307 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.75■□□□□ 0.27
SSR1P43307 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.75■□□□□ 0.27
SSR1P43307 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.75■□□□□ 0.27
SSR1P43307 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
SSR1P43307 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SSR1P43307 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SSR1P43307 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.75■□□□□ 0.27
SSR1P43307 AC004987.2-201ENST00000395959 1148 ntBASIC16.75■□□□□ 0.27
SSR1P43307 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.75■□□□□ 0.27
SSR1P43307 AL139010.1-201ENST00000454878 894 ntBASIC16.75■□□□□ 0.27
SSR1P43307 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.75■□□□□ 0.27
SSR1P43307 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.75■□□□□ 0.27
SSR1P43307 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.75■□□□□ 0.27
SSR1P43307 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 MIR3687-2-201ENST00000577708 61 ntBASIC16.75■□□□□ 0.27
SSR1P43307 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.75■□□□□ 0.27
SSR1P43307 MIR3687-1-201ENST00000614492 61 ntBASIC16.75■□□□□ 0.27
SSR1P43307 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SSR1P43307 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.75■□□□□ 0.27
SSR1P43307 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.75■□□□□ 0.27
SSR1P43307 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.75■□□□□ 0.27
SSR1P43307 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.75■□□□□ 0.27
SSR1P43307 AL137784.3-201ENST00000623858 2288 ntBASIC16.75■□□□□ 0.27
SSR1P43307 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.75■□□□□ 0.27
SSR1P43307 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SSR1P43307 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSR1P43307 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSR1P43307 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSR1P43307 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SSR1P43307 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.74■□□□□ 0.27
SSR1P43307 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSR1P43307 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SSR1P43307 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SSR1P43307 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSR1P43307 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.74■□□□□ 0.27
SSR1P43307 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSR1P43307 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SSR1P43307 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC16.74■□□□□ 0.27
SSR1P43307 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSR1P43307 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SSR1P43307 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSR1P43307 KRT18P32-201ENST00000424695 1287 ntBASIC16.74■□□□□ 0.27
SSR1P43307 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.74■□□□□ 0.27
SSR1P43307 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.74■□□□□ 0.27
SSR1P43307 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.74■□□□□ 0.27
SSR1P43307 MIR4469-201ENST00000583919 79 ntBASIC16.74■□□□□ 0.27
SSR1P43307 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.74■□□□□ 0.27
SSR1P43307 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
SSR1P43307 AC026979.3-201ENST00000607315 403 ntBASIC16.74■□□□□ 0.27
SSR1P43307 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSR1P43307 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SSR1P43307 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSR1P43307 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSR1P43307 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSR1P43307 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
SSR1P43307 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSR1P43307 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSR1P43307 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SSR1P43307 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.73■□□□□ 0.27
SSR1P43307 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SSR1P43307 AC022532.1-201ENST00000624563 1728 ntBASIC16.73■□□□□ 0.27
SSR1P43307 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.73■□□□□ 0.27
SSR1P43307 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms