Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 BEND3P1-201ENST00000421591 1944 ntBASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 CRYGEP-201ENST00000412192 528 ntBASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 KRT18P21-201ENST00000515767 1272 ntBASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 PRELID1P1-202ENST00000567272 903 ntBASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 REXO1L2P-201ENST00000425429 2069 ntBASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
DUXBA0A1W2PPF3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 ACE3P-201ENST00000423435 1973 ntBASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 IGLL3P-201ENST00000412472 434 ntBASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 AF186996.4-201ENST00000467186 377 ntBASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 AC012640.2-201ENST00000561606 901 ntBASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 AL031008.1-201ENST00000619963 541 ntBASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 AC007686.3-201ENST00000619017 3487 ntBASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUXBA0A1W2PPF3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms