Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 AL035252.4-201ENST00000624174 288 ntBASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COL4A3BPQ9Y5P4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A3BPQ9Y5P4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.52■□□□□ 0.39
COL4A3BPQ9Y5P4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
COL4A3BPQ9Y5P4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A3BPQ9Y5P4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COL4A3BPQ9Y5P4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.52■□□□□ 0.39
COL4A3BPQ9Y5P4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 AC239800.4-201ENST00000603712 296 ntBASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 AC008494.3-201ENST00000606615 944 ntBASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 AC099568.2-201ENST00000609194 695 ntBASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 AC007431.3-201ENST00000623221 587 ntBASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COL4A3BPQ9Y5P4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.5■□□□□ 0.39
COL4A3BPQ9Y5P4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms