Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 AC018892.3-201ENST00000623986 2499 ntBASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 RPL13P2-201ENST00000440687 659 ntBASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 AC123567.1-201ENST00000548294 1261 ntBASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 AL450472.2-201ENST00000603663 1156 ntBASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIP2Q9UDT6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 CU639417.3-201ENST00000624240 1404 ntBASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 AC098850.1-201ENST00000419919 790 ntBASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 AC099568.2-201ENST00000609194 695 ntBASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 MIR8072-201ENST00000614241 80 ntBASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 NFIC-211ENST00000641145 8399 ntBASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIP2Q9UDT6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 AP002414.2-201ENST00000591780 3365 ntBASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 RARRES2P5-201ENST00000564013 466 ntBASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIP2Q9UDT6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms