Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC14.97□□□□□ -0.01
RIF1Q5UIP0 AL136295.7-201ENST00000619226 1200 ntBASIC14.97□□□□□ -0.01
RIF1Q5UIP0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 GGT3P-204ENST00000453783 1664 ntBASIC14.96□□□□□ -0.01
RIF1Q5UIP0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 LRRC59-203ENST00000576448 1531 ntBASIC14.96□□□□□ -0.01
RIF1Q5UIP0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 AC139713.2-201ENST00000641328 2723 ntBASIC14.96□□□□□ -0.01
RIF1Q5UIP0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 KRT17P4-201ENST00000429445 819 ntBASIC14.96□□□□□ -0.01
RIF1Q5UIP0 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 AC114812.1-204ENST00000449669 728 ntBASIC14.96□□□□□ -0.01
RIF1Q5UIP0 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 AL358472.3-201ENST00000608147 415 ntBASIC14.96□□□□□ -0.01
RIF1Q5UIP0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIF1Q5UIP0 AL138781.2-201ENST00000617896 1843 ntBASIC14.96□□□□□ -0.01
RIF1Q5UIP0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RIF1Q5UIP0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RIF1Q5UIP0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
RIF1Q5UIP0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.96□□□□□ -0.02
RIF1Q5UIP0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RIF1Q5UIP0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RIF1Q5UIP0 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 AL162426.1-201ENST00000624141 743 ntBASIC14.95□□□□□ -0.02
RIF1Q5UIP0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.95□□□□□ -0.02
RIF1Q5UIP0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 AC092638.2-201ENST00000441105 947 ntBASIC14.95□□□□□ -0.02
RIF1Q5UIP0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 AC134043.2-201ENST00000624206 2238 ntBASIC14.95□□□□□ -0.02
RIF1Q5UIP0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
RIF1Q5UIP0 BCAS2P2-201ENST00000425064 674 ntBASIC14.94□□□□□ -0.02
RIF1Q5UIP0 HLA-DPA2-205ENST00000433582 733 ntBASIC14.94□□□□□ -0.02
RIF1Q5UIP0 CHMP1AP1-201ENST00000445563 662 ntBASIC14.94□□□□□ -0.02
RIF1Q5UIP0 RN7SL396P-201ENST00000471086 295 ntBASIC14.94□□□□□ -0.02
RIF1Q5UIP0 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms