Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Gm13296-201ENSMUST00000117854 997 ntBASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Gm13045-201ENSMUST00000119019 712 ntBASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Gm24749-201ENSMUST00000157838 343 ntBASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Gm43916-201ENSMUST00000205062 967 ntBASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Gzmn-202ENSMUST00000225535 989 ntBASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Gm44891-201ENSMUST00000208817 2223 ntBASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim41Q5NCC3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Trim41Q5NCC3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim41Q5NCC3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC21.89■■□□□ 1.1
Trim41Q5NCC3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Trim41Q5NCC3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim41Q5NCC3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim41Q5NCC3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC21.89■■□□□ 1.09
Trim41Q5NCC3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC21.89■■□□□ 1.09
Trim41Q5NCC3 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC21.89■■□□□ 1.09
Trim41Q5NCC3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC21.89■■□□□ 1.09
Trim41Q5NCC3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim41Q5NCC3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim41Q5NCC3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim41Q5NCC3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim41Q5NCC3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim41Q5NCC3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim41Q5NCC3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Ighv1-86-201ENSMUST00000200562 353 ntBASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Gm45433-201ENSMUST00000209386 247 ntBASIC21.88■■□□□ 1.09
Trim41Q5NCC3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Prrxl1-205ENSMUST00000228878 723 ntBASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim41Q5NCC3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 AC154305.4-201ENSMUST00000224520 614 ntBASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Trim41Q5NCC3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim41Q5NCC3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms