Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 API5-211ENST00000534695 560 ntTSL 5 BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 AC005225.4-201ENST00000557330 545 ntBASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 TP53TG3HP-202ENST00000569755 579 ntBASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 AC012645.4-201ENST00000610691 1061 ntBASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 AC004790.1-201ENST00000612686 536 ntBASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 SLC7A15P-201ENST00000424028 1363 ntBASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 AC024909.3-201ENST00000611513 2257 ntBASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 AC011477.6-201ENST00000604980 1927 ntBASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP3Q9BWW4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
SSBP3Q9BWW4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
SSBP3Q9BWW4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
SSBP3Q9BWW4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.15□□□□□ -0.31
SSBP3Q9BWW4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.15□□□□□ -0.31
SSBP3Q9BWW4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 AL589987.1-201ENST00000453380 819 ntBASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 RN7SL692P-201ENST00000464677 288 ntBASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 AC023310.3-201ENST00000557027 670 ntBASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 AC100756.1-201ENST00000562736 682 ntBASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 AC138749.3-201ENST00000567691 622 ntBASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 LINC01115-203ENST00000606068 577 ntBASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 AC116165.1-201ENST00000611806 668 ntBASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.14□□□□□ -0.31
SSBP3Q9BWW4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 AC067930.6-201ENST00000623257 4947 ntBASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSBP3Q9BWW4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms